Tag Archives: pathogens

Mark Your Calendars: Pathogens Web Seminar on December 5

By Food Safety Tech Staff
No Comments

Next month Food Safety Tech is hosting a complimentary virtual event, “Pathogens: Getting to the Source, Prevention Strategies that Work“, which takes on Thursday, December 5 from 1–4 pm ET. The web seminar brings together subject matter experts who will share their perspectives on pathogen contamination, smarter facility design and operational hygiene, and important prevention strategies.

Speakers include:

  • Larry Cohen, Principal Microbiologist, Food Safety Department, TreeHouse Foods, Inc.
  • David Pirrung, Owner, DCP Consulting
  • Dave Evanson, Technical Consultant, Merieux NutriSciences

Attendees will have the opportunity to ask speakers questions during the live Q&A session that follows each presentation. Register now for this special Pathogens Web Seminar.

This event is sponsored by Millipore Sigma and Bayer Digital Pest Management.

Brett Madden, Aviaway
Bug Bytes

How to Prepare an Integrated Bird Management Audit Program

By R. Brett Madden
No Comments
Brett Madden, Aviaway

Birds of different species can become a pest problem depending upon where they are landing, roosting or nesting. In terms of food facilities, birds can cause various concerns: Product safety risks, possible contamination (bird droppings/feathers), poor audit grades, inspection failure, secondary insect pest problems, vectoring of foodborne illness pathogens, plant closures or fines. It is for these reasons that it is essential that food, beverage and product manufacturers (FBP) establish an integrated bird management (IBM) program.

An IBM program will ensure that every essential team member is on the same page in terms of the protocols for managing pest birds within and around the facility. Even if a facility has taken a proactive approach to bird control, the potential exists for birds to enter a facility. Especially considering bird pressures around adjacent properties, buildings, bodies of water and food sources near the facility.

Read Part I of this series: Bird Problems and Control Methods for Food Production FacilitiesIBM for food industry facilities is a systematic approach to preventing birds from gaining access within a facility and reducing the length of time birds remain within a facility. Nuisance birds, depending upon how severe the bird pressure—i.e., how many birds are landing, roosting and/or nesting within a given area—can cause severe damage to equipment, property, food products, displays, vegetation, façade signage, ledges, roofs, HVAC equipment, drains, fire suppression, electrical equipment and more. The longer that birds are permitted to remain within and around a facility, the more damage they can cause, and the harder it is to remedy the problem. Thus, it is critical to remove any birds that have gained entry as soon as possible to prevent possible FBP contamination and the birds getting comfortable within the facility.

There are several components to developing an IBM program. First, you need to conduct a complete inspection of the interior/exterior of the facility, followed by a review of the current data as well as any historical bird data. Now that you have all the raw data, you can begin developing the site-specific IBM plan for the FBP facility. Now that you have the program designed, the program can be implemented. Finally, after a defined timeframe that the IBM program has been active, the program needs to be evaluated to determine if any adjustments need to be made to the program.

Inspection

The first step in developing an IBM program is to conduct an initial site inspection audit of the interior and exterior of the facility.

Integrated bird management, audits, food safety
An example of an integrated bird management food safety audit checklist. Credit: Aviaway

The following various elements need to be inspected and with said findings documented.

Interior audit, pest management
An example of an interior audit spreadsheet. Source: Aviaway. (Click to enlarge)

On the interior of the facility, look at the following items:

  • Active Birds with the Facility
    • List the areas and locations of birds
      • Example: Location(s): Food prep area(s), warehouse, etc.
    • Any history of birds and related areas
  • Interior Landscaping
    • Type(s) and necessity
  • Food Processing Areas
    • Any active control measures in place
    • Assess the level of risk
  • Bay Doors
  • Location(s): Gaps
  • Location(s): Bumpers
  • General Doors
    • Location(s): Gaps
    • Location(s): Bumpers
    • Location(s): Structural
    • Location(s): Doors left open
  • Additional Access Point(s)
    • Check all equipment areas that enter/exit building
  • Pipe-Line Penetrations
  • Sanitation
  • Conductive Conditions
    • Location(s): Standing water
    • Location(s): Food Sources
    • Debris
  • Bird Droppings or Nesting Materials
  • Staff feeding birds
    • All access to food and water
Exterior audit, pest management
An example of an exterior audit spreadsheet. Source: Aviaway. (Click to enlarge)

On the exterior of the facility, look at the following items:

  • Active birds with the facility
    • List the areas and locations of birds
      • Example: Locations(s): Rear loading dock
    • Any history of birds around the exterior of the facility
  • Adjacent Structures
    • Accessory buildings and structures
  • Sanitation Practices (Exterior)
    • Location(s): Dumpsters
    • Exposed food sources and spillage
  • Trash Receptacles
  • Trash Removal Frequency
  • Food Waste on Ground
  • Cleaning Practices
  • Cleaning Practices Schedule
  • Cleaning Food Waste Bins
  • Motion Doors
  • Bay Doors (Exterior)
    • Location(s): Gaps
    • Location(s): Bumpers
    • Location(s): Structural
  • General Doors (Exterior)
    • Location(s) Doors Being Left Open
  • Additional Access Point(s)
  • Bodies of Water
  • Conductive Conditions
  • Structural (Exterior)
    • Location(s): Pipe-Line Penetrations
    • Location(s): Flashing
    • Location(s): Pipes
    • Location(s): Openings
    • Location(s): Roof
    • Location(s): Roof Hatches
    • Location(s): Windows
    • Location(s): Canopy (Front/Rear)
    • Location(s): Awnings (Front/Rear)
    • Location(s): Façade Signage (Front/Rear/Side)
  • Drainage
  • Standing Water
  • Clogged Drains
  • Landscaping
    • Retention ponds
  • Bird Droppings or Nesting Materials
  • Exterior Storage
  • Merchandise Displays
  • Existing Bird Control Devices

Review

Next, after all the above items have been inspected and findings recorded, all the data needs to be reviewed. In addtion, all the current bird management practices within the facility, documentation practices, and current audit/inspection findings should be all evaluated together. All this information is your road map for developing your IBM Program. Make sure that while you are collecting all the said raw data, you also speak with all necessary staff to get the most accurate information possible.

Documentation

Now that you have conducted your inspections and collected all the data, it’s time to create a site-specific IBM Policy & Plan for the facility. The development and implementation of the IBM plan will provide the appropriate procedures that are to be implemented to prevent, control and exclude birds from entering a facility and from keeping birds an acceptable distance away from the facility. With proper training and implementation of IBM procedures, there will be a reduced likelihood that birds will be able to enter the facility, and the length of time birds remain inside the facility will be reduced—thus, reducing the level of pest bird damage caused, reducing hazards to food sources, equipment, the public, and the facility environment.

Each facility is unique in its operation, location and potential for bird activity. The facility’s IBM plan will be designed to factor its control options when remedying and preventing bird pressure.

Implementation

Now that you have an IBM Plan, it’s time to implement the plan. First, make any necessary changes based upon findings of the audit and review of all data. Next, correct any conducive conditions that were discovered during the inspection. All the items that may require adjustment may need to be planned out depending upon budgetary constraints. Define staff roles regarding bird control efforts on a front-line facility level. Each member of the action team must fully understand their role and responsibility about the implementation and day-to-day operation of the plan.

The IBM Plan is the roadmap that should be followed for managing pest birds throughout the interior and exterior of the facility and related structures. It will set forth the facility’s bird threshold levels and site-specific facility needs. Furthermore, the IBM Plan will provide in detail how each phase of the plan will be implemented at each facility. The facility coordinator, in collaboration with the IBM coordinator, shall be responsible for the administration and implementation of the IBM plan. Each of their roles and responsibly should be thoroughly reviewed and understood.

Next, conduct staff training on proper bird control removal methods if handing live removal internally. Otherwise, what are the approved processes for third-party vendors who are providing removal services? Finally, conduct a review of the new documentation process to record all necessary data for the IBM program. Data collection is a critical component in evaluating the success of the plan and determining if any adjustments need to be made.

Evaluation

To ensure goal compliance, the IBM program should be evaluated at each site annually. The review must consist of all records, the number of birds that gained access into the store, corrective actions taken (at the facility level and outside efforts), and any plan adjustments. By reviewing all the data collected, the plan’s effectiveness can be determined, and whether alterations need to be made. Note that the IBM plan is not a static document that sits in a binder. The plan will have to evolve as operations change, or the set goals of the program are not met.

Conclusion

A proactive approach to reducing bird populations is critical for food industry facilities. As such, the IBM program will ensure that your entire staff is adequately trained on all the site-specific bird control methods, reduce the frequency of birds entering the facility and create a documented bird control program that is designed for your specific facility.

Seafood

Q3 Hazard Beat: Seafood

By Food Safety Tech Staff
No Comments
Seafood

The following infographic is a snapshot of the hazard trends in seafood from Q3 2019. The information has been pulled from the HorizonScan quarterly report, which summarizes recent global adulteration trends using data gathered from more than 120 reliable sources worldwide. Over the past and next few weeks, Food Safety Tech is providing readers with hazard trends from various food categories included in this report.

hazards, seafood, HorizonScan
2019 Data from HorizonScan by FeraScience, Ltd.

View last week’s hazards in herbs and spices.

Alert

Q3 Hazard Beat: Meat and Meat Products Trends

By Food Safety Tech Staff
No Comments
Alert

The following infographic is a snapshot of the hazard trends in meat and meat products from Q3 2019. The information has been pulled from the HorizonScan quarterly report, which summarizes recent global adulteration trends using data gathered from more than 120 reliable sources worldwide. Over the next several weeks, Food Safety Tech will provide readers with hazard trends from various food categories included in this report.

HorizonScan, Meat hazards
2019 Data from HorizonScan by FeraScience, Ltd.

View last week’s hazards in poultry.

Alec Senese, Bayer Crop Science, Digital Pest Management
Bug Bytes

If You Think Plague Is a Thing of the Past, Think Again

By Alec Senese
No Comments
Alec Senese, Bayer Crop Science, Digital Pest Management

Rodents are vectors of more than 50 pathogens, including plague.1 While plague may be considered a problem of the past, according to the World Health Organization, between 2010 and 2015, there were 3,248 cases of reported plague worldwide and 584 deaths. While it is clearly not the 1300’s when the plague killed millions, the CDC confirms, “plague occurs in rural and semi-rural areas of the western United States, primarily in semi-arid upland forests and grasslands where many types of rodent species can be involved.” While the fact that plague is still lurking is a bit surprising, it should be no surprise that rodents can spread more than 50 diseases. Not the least of these diseases is Salmonella braenderup, the cause of recall of approximately 206,749,248 eggs in 2018. The good news: In the age of IoT, new technology can enable an immediate response to help prevent infestations from growing out of control.

With rodent populations on the rise due to climate change and the resultant public health issues in major cities across the United States, public health officials and pest managers face unimaginable challenges in staying ahead of rapidly growing and spreading rodent infestations. Earlier this year, Los Angeles had a typhus outbreak that resulted from a rat infestation near an encampment for those experiencing homelessness. The unsanitary conditions created a harborage for rats that spread the flea-borne illness. Cases of typhoid have doubled in the area since 2012. When and where will the next pathogen outbreak from rodent activity hit?

If that’s not frightening enough, it is important to highlight that once an infected, flea-carrying rodent enters a facility, eliminating the rodent does not always necessarily mean eliminating the presence of plague pathogens. The World Health Organization explains that once vectors have been introduced through rodents and their fleas, it is not enough to eliminate rodents. Vector control must take place before rodent control because “killing rodents before vectors will cause the fleas to jump to new hosts.”

Controlling the spread of pathogens via rodents is becoming increasingly important, particularly in sensitive environments like food processing and manufacturing facilities. Effective management begins with early and accurate detection and sustained through continuous monitoring. However, the traditional method of manual rodent inspection by its very nature cannot provide facility and pest managers with either early detection or continuous monitoring.

Thanks to IoT, monitoring systems can now be used in a wide variety of rodent monitoring devices inside and outside a facility. The systems transmit messages in real time over wireless networks and provide pest managers, facility management and public health officials with 24/7 visibility of rodent activity in a monitored location, which will enable more timely responses and help improve the effectiveness of mitigation efforts. Digital IoT technologies are rapidly becoming the modern proactive tool used to help predict and control rodent issues before they occur in an age when traditional, reactive methods are insufficient.

Reference

  1. Meerburg, B.G., Singleton, G.R., and Kijlstra, A. (2009). “Rodent-borne Diseases and their Risk for Public Health”. Crit Rev Microbiol.
Jill Ellsworth, Willow Industries
FST Soapbox

Modeling Cannabis Safety from Food and Beverage Quality Regulations

By Jill Ellsworth
1 Comment
Jill Ellsworth, Willow Industries

There’s a reason you can eat or drink pretty much anything you want from American grocery stores and not get sick. Food manufacturing is highly regulated and subject to rigorous quality control.

Before food and beverages hit store shelves, the manufacturer must have a Hazard Analysis Critical Control Point (HACCP) system in place. The HACCP system requires that potential hazards—biological, chemical and physical— be identified and controlled at specific points in the manufacturing process. In addition, fresh foods undergo a kill-step. This is the point in the manufacturing or packaging process where food is treated to minimize and remove deadly pathogens like bacteria, mold, fungus and E. coli.

Generally speaking, when cannabis hits dispensary shelves, a less stringent set of rules apply, despite the fact that cannabis is ingested, inhaled and used as medicine. Cultivators are required to test every batch, but each state differs in what is required for mandated testing. Compared to the way food is regulated, the cannabis industry still has a long way to go when it comes to consumer safety—and that poses a considerable public health risk. In the early stages of legalization, the handful of legal states did not have rigid cannabis testing measures in place, which led to inconsistent safety standards across the country. State governments have had a reactionary approach to updating testing guidelines, by and large implementing stricter standards in response to product recalls and customer safety complaints. While local regulators have had the best intentions in prioritizing consumer safety, it is still difficult to align uniform cannabis testing standards with existing food safety standards while cannabis is a Schedule I substance.

The stark differences in safety measures and quality controls were first obvious to me when I moved from the food and beverage industry into the cannabis industry. For five years, I operated an organic, cold-pressed juice company and a natural beverage distribution company and had to adhere to very strict HACCP guidelines. When a friend asked me for advice on how to get rid of mold on cannabis flower, a light bulb went off: Why was there no kill step in cannabis? And what other food safety procedures were not being followed?

What to know more about all things quality, regulatory and compliance in the cannabis industry? Check out Cannabis Industry Journal and sign up for the weekly newsletterThe current patchwork of regulations and lack of food safety standards could have dire effects. It not only puts consumer health in jeopardy, but without healthy crops, growers, dispensaries and the entire cannabis supply chain can suffer. When a batch of cannabis fails microbial testing, it cannot be sold as raw flower unless it goes through an approved process to eliminate the contamination. This has severe impacts on everyone, starting with the cultivator. There are delays in harvesting and delivery, and sometimes producers are forced to extract their flower into concentrates, which really cuts into profits. And in the worst cases, entire crop harvests may have to be destroyed.

So, what do cannabis cultivators and manufacturers have to fear the most? Mold. Out of all the pathogens, mold is the most problematic for cannabis crops, perhaps because it is so resilient. Mold can withstand extreme heat, leaving many decontamination treatments ineffective. And most importantly, mold can proliferate and continue to grow. This is commonplace when the cannabis is stored for any length of time. Inhaling mold spores can have serious adverse health effects, including respiratory illness, and can even be deadly for immunocompromised consumers using it for medical reasons.

What the industry needs is a true kill step. It’s the only way to kill mold spores and other pathogens to ensure that they will not continue to grow while being stored. States that mandate microbial testing will benefit from the kill step because more cultivators will be in compliance earlier in the process. In states that don’t require comprehensive microbial testing, like Washington and Oregon, the kill step is a critical way to provide consumers with a preemptive layer of protection. Microbial testing and preventative decontamination measures encourage customer brand loyalty and prevents negative press coverage.

Adopting a HACCP system would also build additional safeguards into the system. These procedures provide businesses with a step-by-step system that controls food safety, from ingredients right through to production, storage and distribution, to sale of the product and service for the final consumer. The process of creating HACCP-based procedures provides a roadmap for food safety management that ultimately aligns your staff around the goal of keeping consumers safe.

It’s high time for the cannabis industry to adopt FDA-like standards and proactively promote safety measures. Cannabis growers must implement these quality controls to ensure that their products are as safe to consume as any other food or drink on the market. Let’s be proactive and show our consumers that we are serious about their safety.

Recall

Brand Castle Recalls Cookie and Brownie Mix, Linked to E. Coli Outbreak in Flour

By Food Safety Tech Staff
No Comments
Recall

Last Friday Brand Castle, LLC announced a recall of 25 oz and 32 oz glass jars of its Brand Castle and Sisters’ Gourmet cookie and brownie mix due to concern over E. coli contamination. The voluntary recall is in cooperation with the recall being conducted by ADM Milling, as the company is a supplier of flour to Brand Castle. There is a full list of the affected products, along with product photos, in a company announcement on FDA’s website.

On June 14, King Arthur issued a voluntary recall of its five-pound bags of unbleached all-purpose flour in connection with the current E. coli outbreak related to ADM Milling Co.

King Arthur Flour, E.coli, Recall

ADM Milling Recall Extends to King Arthur Flour, Voluntary Recall Issued

By Food Safety Tech Staff
No Comments
King Arthur Flour, E.coli, Recall
King Arthur Flour, E.coli, Recall
King Arthur Flour is voluntarily recalling 14,218 cases of product.

Another customer of ADM Milling Co., King Arthur Flour, Inc., is voluntarily recalling its five-pound bags of unbleached all-purpose flour due to potential contamination with E. coli O26. The recall affects 14,218 cases of product with six specific lot codes and “best used by” dates of 12/07/19, 12/08/19 and 12/14/19. According to a King Arthur Flour company announcement, ADM Milling notified them that certain wheat used to make the above-mentioned product lots has been linked to an ongoing E.coli outbreak. King Arthur Flour states that this recall does not affect its products sold through the company’s website, Baker’s Catalogue or its Baker’s Store in Norwich, VT.

Just a couple of weeks ago, ADM Milling expanded its flour recall to include all five-pound bags of Bakers Corner All Purpose Flour, which is packaged by ALDI.

Consumers are advised to discard the product or return them to the place of purchase for a credit or refund.

Thus far, the investigation of E.coli O26 involving ADM Milling Flour has been linked to 17 illnesses and three hospitalizations.

Megan Nichols
FST Soapbox

Technology Tools Improving Food Safety

By Megan Ray Nichols
No Comments
Megan Nichols

To cap off a tumultuous year for foodborne illnesses, the end of 2018 saw a rather large E. coli outbreak that affected several different types of lettuce. In all, about 62 people got sick in the United States, with another 29 affected in Canada. The outbreak was traced back to a farm in California thanks to a specific DNA fingerprint in the E. coli. It started in a water reservoir and spread to the nearby crops.

Unfortunately, the event was only one of two separate incidents involving romaine lettuce last year. Another E.coli outbreak was traced back to a source in Arizona. Are these outbreaks more common than we realize? The CDC estimates that 48 million Americans fall ill each year from foodborne pathogens. Of those who get sick, 128,000 have to be hospitalized, and about 3,000 perish.

It’s clear that the industry as a whole needs to buckle down and find more effective solutions, not just for preventing outbreaks but also for mitigating damage when they happen. A new level of safety and management can be achieved with the help of many new, innovative technologies.

The following are some of the technology tools shaping the future of food safety and quality management fields.

Blockchain

As a result of the E. coli outbreak, Walmart implemented blockchain technology to track leafy greens and boost supply chain transparency. The systems and infrastructure is anticipated to be in place by the end of 2019.

Blockchain is a secure, digital ledger. It holds information about various transactions and data, all of which are carried out on the network. It’s called a blockchain because each data set within the network is a chunk or “block,” and they’re all linked to one another—hence the chain portion of the name. What this allows for is complete transparency throughout the supply chain, because you can track goods from their origin all the way to distribution and sale.

Each block is essentially a chunk of information, and when it’s entered into the chain, it cannot be altered, modified or manipulated. It’s simply there for viewing publicly. You cannot alter information contained within a single block without modifying the entire chain—which operates much like a peer-to-peer network and is split across many devices and servers.
This unique form of security establishes trust, accuracy and a clear representation of what’s happening. It allows a company to track contaminated foods along their journey, stopping them before they contaminate other goods or reach customers.

Infrared Heating

Thanks to the rising popularity of ready-to-eat meals, the industry is under pressure to adopt preservation and pasteurization methods. Particularly, they must be able to sanitize foods and package them with minimal exposure and bacteria levels. This practice allows them to stay fresh for longer and protects customers from potential foodborne illness.

Infrared heating is a method of surface pasteurization, and has been used for meats such as ham. Infrared lamps radiate heat at low temperatures, effectively killing surface bacteria and contaminants. The idea is to decontaminate or sanitize the surface of foods before final packaging occurs.

Industrial IoT and Smart Sensors

The food and beverage industry has a rather unique challenge with regard to supply chain operations. Food may be clean and correctly handled at the source with no traces of contamination, but it’s then passed on to a third party, which changes the game. Maybe a refrigerated transport breaks down, and the food within is thawed out. Perhaps a distributor doesn’t appropriately store perishable goods, resulting in serious contamination.

This transportation stage can be more effectively tracked and optimized with the help of modern IoT and smart, connected sensors. RFID tags, for instance, can be embedded in the packaging of foods to track their movements and various stats. Additional sensors can monitor storage temps, travel times, unexpected exposure, package tears and more.

More importantly, they’re often connected to a central data processing system where AI and machine learning platforms or human laborers can identify problematic changes. This setup allows supply chain participants to take action sooner in order to remedy potential problems or even pull contaminated goods out of the supply.

They can also help cut down on fraud or falsified records, which is a growing problem in the industry. Imagine an event where an employee says that a package was handled properly via forms or reporting tools, yet it was exposed to damaging elements. The implications of even simple fraud can be significant. Technology that automatically and consistently reports information—over manual entry—can help eliminate this possibility altogether.

Next-Generation Sequencing

NGS refers to a high-throughput DNA sequencing process that is now available to the food industry as a whole. It’s cheaper, more effective and takes a lot less time to complete, which means DNA and RNA sequencing is more accessible to food companies and suppliers now than it ever has been.

NGS can be used to assess and sequence hundreds of different samples at a time at rates of up to 25 million reads per experiment. What that means is that monitoring teams can accurately identify foodborne pathogens and contamination at the speed of the modern market. It is also a highly capable form of food safety measurement and is quickly replacing older, molecular-based methods like PCR.

Ultimately, NGS will lead to vastly improved testing and measurement processes, which can identify potential issues faster and in higher quantities than traditional methods. The food industry will be all the better and safer for it.

The Market Is Ever Evolving

While these technologies are certainly making a splash—and will shape the future of the food safety industry—they do not exist in a vacuum. There are dozens of other technologies and solutions being explored. It is important to understand that many new technologies could rise to the surface even within the next year.

The good news is that it’s all meant to improve the industry, particularly when it comes to the freshness, quality and health of the goods that consumers eat.

Stephanie Pollard, ClearLabs
In the Food Lab

The Power of Advanced NGS Technology in Routine Pathogen Testing

By Stephanie Pollard
No Comments
Stephanie Pollard, ClearLabs

The food industry is beginning to transition into an era of big data and analytics unlike anything the industry has ever experienced. However, while the evolution of big data brings excitement and the buzz of new possibilities, it also comes coupled with an element of confusion due to the lack of tools for interpretation and lack of practical applications of the newly available information.

As we step into this new era and begin to embrace these changes, we need to invest time to educate ourselves on the possibilities before us, then make informed and action-oriented decisions on how to best use big data to move food safety and quality into the next generation.

Stephanie Pollard will be presenting “The Power of Advanced NGS Technology in Routine Pathogen Testing” at the 2018 Food Safety Consortium | November 13–15One of the big questions for big data and analytics in the food safety industry is the exact origins of this new data. Next Generation Sequencing (NGS) is one new and disruptive technology that will contribute significantly to a data explosion in our industry.

NGS-based platforms offer the ability to see what was previously impossible with PCR and other technologies. These technologies generate millions of sequences simultaneously, enabling greater resolution into the microbial ecology of food and environmental surfaces.

This represents a seismic shift in the food safety world. It changes the age-old food microbiology question from: “Is this specific microbe in my sample?” to “what is the microbial makeup of my sample?”

Traditionally, microbiologists have relied on culture-based technologies to measure the microbial composition of foods and inform risk management decisions. While these techniques have been well studied and are standard practices in food safety and quality measures, they only address a small piece of a much bigger microbial puzzle. NGS-based systems allow more complete visibility into this puzzle, enabling more informed risk management decisions.

With these advances, one practical application of NGS in existing food safety management systems is in routine pathogen testing. Routine pathogen testing is a form of risk assessment that typically gives a binary presence/absence result for a target pathogen.

NGS-based platforms can enhance this output by generating more than the standard binary result through a tunable resolution approach. NGS-based platforms can be designed to be as broad, or as specific, as desired to best fit the needs of the end user.

Imagine using an NGS-based platform for your routine pathogen testing needs, but instead of limiting the information you gather to yes/no answers for a target pathogen, you also obtain additional pertinent information, including: Serotype and/or strain identification, resident/transient designation, predictive shelf-life analysis, microbiome analysis, or predictive risk assessment.

By integrating an NGS-based platform into routine pathogen testing, one can begin to build a microbial database of the production facility, which can be used to distinguish resident pathogens and/or spoilage microbes from transient ones. This information can be used to monitor and improve existing or new sanitation practices as well as provide valuable information on ingredient quality and safety.

This data can also feed directly into supplier quality assurance programs and enable more informed decisions regarding building partnerships with suppliers who offer superior products.

Similarly, by analyzing the microbiome of a food matrix, food producers can identify the presence of food spoilage microbes to inform more accurate shelf-life predictions as well as evaluate the efficacy of interventions designed to reduce those microbes from proliferating in your product (e.g. modified packaging strategies, storage conditions, or processing parameters).

Envision a technology that enables all of the aforementioned possibilities while requiring minimal disruption to integrate into existing food safety management systems. NGS-based platforms offer answers to traditional pathogen testing needs for presence/absence information, all the while providing a vast amount of additional information. Envision a future in which we step outside of our age-old approach of assessing the safety of the food that we eat via testing for the presence of a specific pathogen. Envision a future in which we raise our standards for safety and focus on finding whatever is there, without having to know in advance what to look for.

Every year we learn of new advancements that challenge the previously limited view on the different pathogens that survive and proliferate on certain food products and have been overlooked (e.g., Listeria in melons). Advanced NGS technologies allow us to break free of those associations and focus more on truly assessing the safety and quality of our products by providing a deeper understanding of the molecular makeup of our food.